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How to cite CellProfiler Analyst CellProfiler Analyst 3.0: Accessible data exploration and machine learning for image analysis. by David R. Stirling, Anne E. Carpenter, and Beth A. Cimini (2021), Bioinformatics, doi or CellProfiler Analyst: interactive data exploration, analysis, and classification...
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Getting Started with CellProfiler in Batch
Guest Author This post was written by a guest author, Jillian Rowe, who can be reached at jillian@dabbleofdevops.com. Running CellProfiler in batch mode is the ideal way to automate large scale analyses. Or not so large scale analyses that you prefer to automate! One of the benefits of running...
Datasets
Processed Data CCLE data Broad DepMap Portal : The most recently processed and up-to-date CCLE datasets along with many perturbation datasets. List of Cell lines Cell line annotations Genetic Data Merged mutation calls (Coding regions, germlin filtered) CCLE structural variants (SvABA calls) for 329...
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