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Driving Biological Projects

Current COBA Driving Biological Projects are listed below. Interested in becoming one of our Driving Biological Project partners? See our page on how to our collaborate with us or fill out our Project Inquiry form. Principal Investigator Institution Project Description Robert Edwards University of...

Anne Carpenter featured in Science magazine

COBA's Anne Carpenter today was featured in a Science magazine article on artificial intelligence and its revolutionary role in the field of microscopy. Read the full article here.

COBA and the future of dataset sharing

The Center for Open Bioimage Analysis was noted in a Technology Feature published today by Nature, particularly the Center's priority of sharing bioimaging data sets and deep-learning models. The piece, " Deep learning takes on tumours" by Esther Landhuis, also describes co-founder Anne Carpenter's...

COBA on YouTube

The Center for Open Bioimage Analysis is now on YouTube! Subscribe to be the first to see new COBA workshops and trainings. While you're there, don't forget to check out our playlists for helpful videos from CellProfiler, ImageJ, NEUBIAS, iBiology, and more!

Survey for image analysis needs — community input needed

COBA's mission is to serve the biology community’s growing need for sophisticated software for light microscopy image analysis. We will do this in two main ways: In collaboration with biological partner labs we will create new tools and improve existing tools to make new analyses possible and...

I2K 2022 Conference - From Images to Knowledge with ImageJ & Friends

The Center for Open Bioimage Analysis (COBA) at Broad Institute and LOCI UW-Madison, as well as the Fiji development team at Max Planck Institute of Molecular Cell Biology and Genetics in Dresden, is pleased to formally announce the 2022 “From Images to Knowledge with ImageJ & Friends (I2K)”...

COBA paper on ImageJ and CellProfiler rated #1

COBA paper on ImageJ and CellProfiler rated #1 in Altmetrics for Best of Current Protocols 2021! ImageJ and CellProfiler: Complements in Open-Source Bioimage Analysis ImageJ and CellProfiler have long been leading open-source platforms in the field of bioimage analysis. ImageJ's traditional strength...

Published: "CellProfiler 4: improvements in speed, utility and usability"

BMC Bioinformatics published a paper by members of the COBA team detailing the release of CellProfiler 4. CellProfiler 4 provides significantly improved performance in complex workflows compared to previous versions. This release will ensure that researchers will have continued access to...

What We Do

Through the collaborative development and dissemination of open source image analysis software, as well as training events and resources, the Center will empower thousands of researchers to apply advanced analytics in innovative ways to address new experimental areas.