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Caicedo, Juan, Claire McQuin, Allen Goodman, Shantanu Singh, and Anne Carpenter. 2018. “Weakly Supervised Learning of Single-Cell Feature Embeddings”. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (CVPR), 9309-18.

Doron, Michael, Théo Moutakanni, Zitong S. Chen, Nikita Moshkov, Mathilde Caron, Hugo Touvron, Piotr Bojanowski, Wolfgang M. Pernice, and Juan C. Caicedo. 2023. “Unbiased Single-Cell Morphology With Self-Supervised Vision Transformers.”

Pernice, Wolfgang M., Michael Doron, Alex Quach, Aditya Pratapa, Sultan Kenjeyev, Nicholas De Veaux, Michio Hirano, and Juan C. Caicedo. 2023. “Out of Distribution Generalization via Interventional Style Transfer in Single-Cell Microscopy”. In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) Workshops.

Moshkov, Nikita, Michael Bornholdt, Santiago Benoit, Matthew Smith, Claire McQuin, Allen Goodman, Rebecca Senft, et al. 2022. “Learning Representations for Image-Based Profiling of Perturbations”. BioRxiv. 2022.