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Our main research theme is empowering biologists with easy-to-use, comprehensively documented tools that facilitate discovery from biological images. From organelles to organisms, we create tools and workflows that allow biologists to find the objects they care about in microscopy images and...

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The CellProfiler project team is based in the Cimini Lab at the Broad Institute of MIT and Harvard. The project was started in 2003 by Anne E. Carpenter and Thouis (Ray) Jones in the Sabatini Laboratory (Whitehead Institute for Biomedical Research) and Golland laboratory (MIT’s CSAIL) and is...