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CellProfiler Analyst Stable (3.0.5): macOS Windows Source code available on Github Previous CellProfiler Analyst releases

Our Team

The Sheng lab is committed to diversity, equity and inclusion and our lab is dedicated to ensuring a welcoming and safe space for all individuals. We actively work to increase the breadth of our applicant pools to create an environment that supports and retains a richly diverse community...

Merkin Prize Jury

The Merkin Prize Jury is composed of scientific leaders from academia and industry in the US and Europe.

Nominate

Nominations for the 2026 Merkin Prize are now open. Click the ”nominate” button below to submit a nomination. Deadline: Friday, December 5, 2025 at 11:59 p.m. ET. Nominate Nomination Package Requirements Contact information for nominator Nominees’ names and organizations If available, please share...

News & Events

May 21, 2025 2025 Merkin Prize in Biomedical Technology awarded to Carl June, Bruce Levine, Isabelle Rivière, and Michel Sadelain for development of CAR T-cell Therapy Produced by the Broad Institute of MIT and Harvard Four biomedical innovators have been jointly awarded the 2025 Richard N. Merkin...

2025 Merkin Prize in Biomedical Technology Recipients

Carl June University of Pennsylvania Perelman School of Medicine Carl June is the Richard W. Vague professor in immunotherapy at the Perelman School of Medicine at the University of Pennsylvania, where he is also the director of the Center for Cellular Immunotherapies. In addition, he is the...

Getting Started

CellProfiler is free, open-source software for quantitative analysis of biological images. No prior experience in programming or computer vision is required – this page is intended to help you get up and running. The quickest way to get up and running with CellProfiler is to: Download CellProfiler...

Examples

Previous Examples Previous examples (prior to 4.0) can be found on the previous examples page, but we discourage their use because they are now outdated.