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CellProfiler Analyst in a nutshell CellProfiler Analyst (CPA) allows interactive exploration and analysis of data, particularly from high-throughput, image-based experiments. Its most popular feature is a supervised machine learning system ("Classifier") that can be trained to recognize complicated...
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Domain to Data: Carpenter shares her journey from biologist towards computer science
Today, Cell Press journal Patterns published a feature by COBA's own Dr. Anne Carpenter in their "People of Data" series discussing her transition from being a biologist to leading an entirely computational group. In the piece, Carpenter offers great insight for those who may be considering a...
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Open-Source Bioimage Analysis Software to Accelerate Drug Discovery | SciPy 2020 Keynote | Anne Carpenter
COBA's Anne Carpenter gave a keynote presentation at SciPy2020 on July 9, 2020. The keynote presentation, Open-Source Bioimage Analysis Software to Accelerate Drug Discovery, is available to view in full below and on YouTube.
Human U2OS cells – Small molecule Cell Painting experiment
Accession number BBBC040 · Version 1 Example images Biological application An ideal small-molecule screening library would be enriched in non-redundant bioactive compounds that maximize the performance diversity of the library. The construction of such libraries would be aided by a rapid feedback...
2022 Dates Announced: From Images to Knowledge with ImageJ & Friends (I2K)
Originally slated for Fall of 2020, we are excited to announce new dates for the "From Images to Knowledge with ImageJ & Friends (I2K)" conference: Sept 23-24, 2021 May 9-10, 2022! Watch here for more info.
Nuclei of mouse embryonic cells
Accession number BBBC050 · Version 2 Example images Biological application Cell dynamics during the early mouse embryogenesis change spatiotemporally. For understanding the mechanism of this developmental process, imaging cell dynamics by live-cell imaging of fluorescently labeled nuclei and...