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We welcome contributions of the following: Image sets with descriptions and ground truth High-throughput image sets Published benchmarking results of algorithms applied to the BBBC image sets Corrections to existing descriptions or ground truth Feedback on the benchmarking methodology or other...

Accession number BBBC040 · Version 1 Example images Biological application An ideal small-molecule screening library would be enriched in non-redundant bioactive compounds that maximize the performance diversity of the library. The construction of such libraries would be aided by a rapid feedback...

Accession number BBBC050 · Version 2 Example images Biological application Cell dynamics during the early mouse embryogenesis change spatiotemporally. For understanding the mechanism of this developmental process, imaging cell dynamics by live-cell imaging of fluorescently labeled nuclei and...

Accession number BBBC036 · Version 1 Example images Description of the biological application Phenotypic profiling attempts to summarize multiparametric, feature-based analysis of cellular phenotypes of each sample so that similarities between profiles reflect similarities between samples. This...

Accession number [BBBCDATASETLINK] · Version [_] Example images Biological application Lorem ipsum dolor sit amet, consectetur adipiscing elit. Nulla pharetra nibh eu massa sodales finibus. Nullam vulputate, quam at finibus lobortis, metus ex efficitur nulla, eu interdum libero massa eu erat. Sed...

Accession number BBBC048 · Version 1 Example images Biological application Abstract: We show that deep convolutional neural networks combined with nonlinear dimension reduction enable reconstructing biological processes based on raw image data. We demonstrate this by reconstructing the cell cycle of...

Identification and segmentation Accession Description Mode Fields per Sample Total Fields Total Images Ground Truth BBBC001 Human HT29 colon-cancer cells Fluorescent 6 6 6 BBBC002 Drosophila Kc167 cells Fluorescent 5 50 50 BBBC003 Mouse embryos DIC 15 15 15 BBBC004 Synthetic cells Fluorescent 20 100...

Accession number BBBC005 · Version 1 Example images In focus Out of focus True foreground Biological application Since robust foreground/background separation and segmentation of cellular objects (i.e.,identification of which pixels below to which objects) strongly depends on image quality, focus...

Accession number BBBC007 · Version 1 Example images DNA Actin Outlined nuclei Outlined cells Biological application Drosophila melanogaster Kc167 cells were stained for DNA (to label nuclei) and actin (a cytoskeletal protein, to show the cell body). Automatic cytometry requires that cells be...