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CellProfiler 4.0 Release: Improvements in speed, utility, and usability

David R. Stirling We have now released CellProfiler version 4.0! Download it here. The primary goal of this release has been to migrate CellProfiler from Python 2 to Python 3. This has involved extensive restructuring of the code base, leading to a lot of “under-the-hood” improvements. Important...

CSHL Epigenetics & Chromatin Meeting

"The fifth Cold Spring Harbor Laboratory meeting on Epigenetics & Chromatin is going fully virtual and will begin late morning EST on Tuesday September 15 and end late afternoon EST on Friday September 18, 2020. Oral sessions will be confined to later morning and afternoon sessions EST to maximize...

Recent research highlights from across the Broad community

Ultrasensitive CRISPR-based diagnostic for field-applicable detection of Plasmodium species in symptomatic and asymptomatic malaria Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing Higher Native Peruvian ancestry proportion is associated with tuberculosis progression risk

About 2

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Research

Our main research theme is quantifying and mining the rich information present in cellular images to yield biological discoveries, often using deep learning. We work on high-throughput projects (100,000-1,000,000 images) probing a variety of biological processes and diseases of interest, with a...

Contact

Email imagingadmin@broadinstitute.org Mailing address Broad Institute of MIT and Harvard415 Main StreetCambridge, MA 02142Our offices are on the 5th floor of 415 Main St [ Google Maps link]. Look for the entrance of our building to the right of the Broad Institute sign.

NSF CAREER project page

NSF CAREER Award Project (March 2012–February 2017) [ Project abstract at nsf.gov] [Project Outcomes Report (search here, using Fed Award ID 1148823 ( PDF))] Non-technical description of the problem: Biologists want to test genetic and chemical treatments in environments that more closely mimic the...

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