JUMP Cell Painting protocol (v3) in press
The newly optimized version 3 of the protocol has been accepted! It is in press at Nature Protocols as Cimini et al. 2023.
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Two publicly available portals to explore the data
Ardigen’s phenAID portal The phenAID JUMP-CP Explorer was created by the Ardigen Data Science and Software Development team to enable easy access and visualization of JUMP-CP data. The web-based application shows a phenotypic and structural representation of the data set colored by clusters. Users...
Data release & Manuscript in BioRxiv
We are excited to share that the JUMP Cell Painting Datasets now include most data components from all but one of the sources for the principal dataset (cpg0016), covering 116,000 chemical and over 20,000 genetic perturbations (covering ~15,000 genes). The first draft of metadata files are available...