Guillermo Barreto Corona
Research Associate II, GRO
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Noam Shoresh, Ph.D.
Associate Director of the Epigenomics Program, Broad Institute Member of the Infectious Disease and Microbiome Program, Broad Institute
Kasper Lage, Ph.D., M.B.A.
Managing Director of the Novo Nordisk Foundation Center, Broad Institute Director of Bioinformatics at the Department of Surgery, Massachusetts General Hospital Associate Professor, Harvard Medical School
Neva Cherniavsky Durand, Ph.D.
Senior Scientist, GRO
Amrita Sule, Ph.D.
Research Scientist II, GRO and dGTEx
Unbiased single-cell morphology with self-supervised vision transformers
Doron, Michael, Théo Moutakanni, Zitong S. Chen, Nikita Moshkov, Mathilde Caron, Hugo Touvron, Piotr Bojanowski, Wolfgang M. Pernice, and Juan C. Caicedo. 2023. “Unbiased Single-Cell Morphology With Self-Supervised Vision Transformers.”
Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements.
Hu, Yan, Sai Ma, Vinay K Kartha, Fabiana M Duarte, Max Horlbeck, Ruochi Zhang, Rojesh Shrestha, et al. 2023. “Single-Cell Multi-Scale Footprinting Reveals the Modular Organization of DNA Regulatory Elements.”. BioRxiv : The Preprint Server for Biology.
Massively parallel base editing to map variant effects in human hematopoiesis.
Martin-Rufino, Jorge D, Nicole Castano, Michael Pang, Emanuelle I Grody, Samantha Joubran, Alexis Caulier, Lara Wahlster, et al. 2023. “Massively Parallel Base Editing to Map Variant Effects in Human Hematopoiesis.”. Cell 186 (11): 2456-2474.e24.
Functional inference of gene regulation using single-cell multi-omics.
Kartha, Vinay K, Fabiana M Duarte, Yan Hu, Sai Ma, Jennifer G Chew, Caleb A Lareau, Andrew Earl, et al. 2022. “Functional Inference of Gene Regulation Using Single-Cell Multi-Omics.”. Cell Genomics 2 (9).
Drug addiction unveils a repressive methylation ceiling in EZH2-mutant lymphoma.
Kwok, Hui Si, Allyson M Freedy, Allison P Siegenfeld, Julia W Morriss, Amanda L Waterbury, Stephen M Kissler, and Brian B Liau. 2023. “Drug Addiction Unveils a Repressive Methylation Ceiling in EZH2-Mutant Lymphoma.”. Nature Chemical Biology.