Search

We are pleased to announce that our first publicly available bio image analysis workflow (an outcome of a collaboration with the Newmark lab at Morgridge Institute for Research) is now available via our COBA GitHub repository. This example workflow automatically detects, orders, and saves individual...

American Society for Cell Biology journal Molecular Biology of the Cell published a manuscript from COBA researchers surveying several new open-source software tools that aim to make deep-learning–based image segmentation accessible to biologists with limited computational experience. Read the paper...

June 24: This interactive workshop will focus on adapting CellProfiler pipelines to new datasets. Undergrad / early grad students will be prioritized, but all are welcome. Sign up (space limited): http://broad.io/cellprofilerworkshopsignup. This course will be jointly led by Julia van den Beemd and...

The American Institute for Medical and Biological Engineering (AIMBE) announced today the election of 174 new members of the AIMBE College of Fellows in recognition of their distinguished and continuing achievements in medical and biological engineering. COBA's own Kevin Eliceiri is among those...

COBA's Anne Carpenter recently won the American Society for Cell Biology's Women in Cell Biology Mid-career Award. As part of this award, Carpenter wrote an award essay, "A well-engineered path into cell biology and academia", published in the November 30 issue of Molecular Biology of the Cell. Of...

COBA's Anne Carpenter today was featured in a Science magazine article on artificial intelligence and its revolutionary role in the field of microscopy. Read the full article here.

Protein Society journal Protein Science published a manuscript from co-PI Kevin Eliceiri's group highlighting the ImageJ codebase and community, including a review of the core features of the ImageJ ecosystem and how ImageJ has responded to imaging technology advancements with new plugins and tools...

The Center for Open Bioimage Analysis was noted in a Technology Feature published today by Nature, particularly the Center's priority of sharing bioimaging data sets and deep-learning models. The piece, " Deep learning takes on tumours" by Esther Landhuis, also describes co-founder Anne Carpenter's...

The Center for Open Bioimage Analysis is now on YouTube! Subscribe to be the first to see new COBA workshops and trainings. While you're there, don't forget to check out our playlists for helpful videos from CellProfiler, ImageJ, NEUBIAS, iBiology, and more!

COBA's mission is to serve the biology community’s growing need for sophisticated software for light microscopy image analysis. We will do this in two main ways: In collaboration with biological partner labs we will create new tools and improve existing tools to make new analyses possible and...