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Anne Carpenter featured in "Automating Drug Discovery With Machine Learning"

Technology Networks recently published "Automating Drug Discovery With Machine Learning" by Neeta Ratanghayra and featured a section on image-based profiling for drug discovery. COBA's Anne Carpenter was featured and spoke about image-based profiling in general as well as the use of machine learning...

*NEW* Video Tutorials

We have added FIVE new video tutorials to our YouTube Channel! Two CellProfiler CZI workshops Two ImageJ CZI workshops CellProfiler "NamesAndTypes" video tutorial: Blog to guide you with this tutorial

Kevin Eliceiri named Fellow of the Optical Society of America

COBA's own Dr. Kevin Eliceiri has been named a 2021 Fellow of the Optical Society of America for outstanding research in cellular microenvironment imaging and bio-image informatics. According to the OSA: This distinction was awarded to 118 OSA members, from 24 countries, for their significant...

New public workflow available!

We are pleased to announce that our first publicly available bio image analysis workflow (an outcome of a collaboration with the Newmark lab at Morgridge Institute for Research) is now available via our COBA GitHub repository. This example workflow automatically detects, orders, and saves individual...

Published: "Open-source deep-learning software for bioimage segmentation"

American Society for Cell Biology journal Molecular Biology of the Cell published a manuscript from COBA researchers surveying several new open-source software tools that aim to make deep-learning–based image segmentation accessible to biologists with limited computational experience. Read the paper...

Free online image analysis workshop for beginners!

June 24: This interactive workshop will focus on adapting CellProfiler pipelines to new datasets. Undergrad / early grad students will be prioritized, but all are welcome. Sign up (space limited): http://broad.io/cellprofilerworkshopsignup. This course will be jointly led by Julia van den Beemd and...