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American Society for Cell Biology journal Molecular Biology of the Cell published a manuscript from COBA researchers surveying several new open-source software tools that aim to make deep-learning–based image segmentation accessible to biologists with limited computational experience. Read the paper...

June 24: This interactive workshop will focus on adapting CellProfiler pipelines to new datasets. Undergrad / early grad students will be prioritized, but all are welcome. Sign up (space limited): http://broad.io/cellprofilerworkshopsignup.This course will be jointly led by Julia van den Beemd and...

Genetic Engineering & Biotechnology News today featured COBA's Anne Carpenter and her group at the Broad Institute for their work launching a Cell Imaging Consortium. The consortium includes 12 pharmaceutical and biotechnology companies and received funding through the Massachusetts Life Sciences...

From Images to Knowledge with ImageJ & Friends (I2K) was originally scheduled for September 17-18, 2020 in Madison, WI. Due to travel restrictions, we are pleased to announce that our partners in the I2K series are holding an online version of the I2K meeting at HHMI Janelia this Nov 30-Dec 2, 2020...

Protein Society journal Protein Science published a manuscript from co-PI Kevin Eliceiri's group highlighting the ImageJ codebase and community, including a review of the core features of the ImageJ ecosystem and how ImageJ has responded to imaging technology advancements with new plugins and tools...

We have now released CellProfiler Analyst 3.0. Bioinformatics published a paper by members of the COBA team outlining the update. In addition to enhanced performance, this CellProfiler Analyst release adds support for neural network classifiers, identifying rare object subsets, and direct transfer...