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Software and code

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CellProfiler CellProfiler is a free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically. More information can be found in the CellProfiler Wiki. Download CellProfiler...

Nodar Gogoberidze

Person: Principal Software Engineer
My background and education, through to my master's degree, has been centered at the intersection of Software Engineering and Data Science. I'm excited by the application of research and innovation in these domains towards slow, arduous, or otherwise intractable problems.

CellProfiler workshop - joint with LABI!

News: February 29, 2024
We will be hosting a free CellProfiler workshop on April 8th, joint with Latin America Bioimaging - with breakout rooms available for Spanish and Portuguese. Get more info and sign up here!

Beth Ann Cimini

Person: Associate Director, Bioimage Analysis, CZI Imaging Scientist
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Training program

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The Postdoctoral Training Program in Bioimage Analysis is an opportunity for biologists with strong interest and some experience in image analysis to develop deeper skills through many different individual projects as well as by supporting thousands of researchers around the world who are...

Kaio de Souza Gomes

Person: Visiting Postdoctoral Scholar
I am a visiting postdoctoral researcher from the Universidade Federal do ABC (UFABC) in Brazil, with a background in Organic Chemistry and Biochemistry, and a strong interest in fluorescence microscopy. My research focuses on understanding the behavior of endometrial cells under various stress...

Collaborate with us

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There are a number of different ways to work with us depending on the scale of the help/collaboration. Don't see a path that matches your needs? We're happy to get creative - please email us to discuss! Scale/Scope Who can access? Who pays? Forum specific questions Anyone Our own grants ( COBA)...

Lab Policy

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Our mission: To uncover biological knowledge and new medicines by developing advanced methods to quantify and mine the rich information present in images. Our motto: Measure everything, ask questions later. Our ethos: - We love to discover the inner workings of biological systems and develop...