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TCR germline diversity reveals evidence of natural selection on variable and joining alpha chain genes.
Mantena, Sreekar, Ali Akbari, and Soumya Raychaudhuri. 2025. “TCR Germline Diversity Reveals Evidence of Natural Selection on Variable and Joining Alpha Chain Genes.”. BioRxiv : The Preprint Server for Biology.
Functional and dysfunctional T regulatory cell states in human tissues in RA and other autoimmune arthritic diseases.
Koh, Byunghee, Shani T Gal Oz, Ryota Sato, Hung N Nguyen, Garrett Dunlap, Chrisopher Mahony, Chrissy Bolton, et al. 2025. “Functional and Dysfunctional T Regulatory Cell States in Human Tissues in RA and Other Autoimmune Arthritic Diseases.”. BioRxiv : The Preprint Server for Biology.
Reproducible single-cell annotation of programs underlying T cell subsets, activation states and functions.
Kotliar, Dylan, Michelle Curtis, Ryan Agnew, Kathryn Weinand, Aparna Nathan, Yuriy Baglaenko, Kamil Slowikowski, et al. 2025. “Reproducible Single-Cell Annotation of Programs Underlying T Cell Subsets, Activation States and Functions.”. Nature Methods.
Isabella Kruger
An Inflammatory and Quiescent HSC Subpopulation Expands with Age in Humans.
Safina, Ksenia R, Dylan A Kotliar, Michelle Curtis, Jonathan D Good, Chen Weng, Shawn David, Soumya Raychaudhuri, et al. 2025. “An Inflammatory and Quiescent HSC Subpopulation Expands With Age in Humans.”. BioRxiv : The Preprint Server for Biology.
A human-mouse atlas of intrarenal myeloid cells identifies conserved disease-associated macrophages in lupus nephritis.
Hoover, Paul J, Chirag Raparia, David J Lieb, Yochay Tzur, Joyce Kang, Arnon Arazi, Rollin Leavitt, et al. 2025. “A Human-Mouse Atlas of Intrarenal Myeloid Cells Identifies Conserved Disease-Associated Macrophages in Lupus Nephritis.”. The Journal of Experimental Medicine 222 (11).