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Merkin Prize Jury
The Merkin Prize Jury is composed of scientific leaders from academia and industry in the US and Europe.
Nominate
Nominations for the 2025 Merkin Prize have closed. Nominations for the 2026 Merkin Prize open August 2025. Nomination package requirements will be uploaded to this page in June 2025. Join the Merkin Prize mailing list to receive updates and notifications.
Published pipelines
CellProfiler enables reproducible research because a saved pipeline includes all the modules and settings. Here, we provide links to pipelines used in some published studies, as well as the version of CellProfiler used to create them. You can instead download the most current version of CellProfiler...
Download
Update September 2024: CellProfiler 4.2.8. release New release for MacOS (Intel and ARM) 13+ is available here New release for Windows 10 and 11 is available here. After June 28th, 2023, if you try to download CellProfiler from a very old browser, you might not be able to due to updated AWS security...
Data Access Request for Researchers
Information for Researchers: If you need access to the drive, please fill out this form: ABIGNET Access Request form If you want to get in contact with the site managers of each country, please find their email information below: India: jayantmahadevan@gmail.com Pakistan: ahassan@broadinstitute.org...
About Me
Getting Started
CellProfiler is free, open-source software for quantitative analysis of biological images. No prior experience in programming or computer vision is required – this page is intended to help you get up and running. The quickest way to get up and running with CellProfiler is to: Download CellProfiler...
Examples
Previous Examples Previous examples (prior to 4.0) can be found on the previous examples page, but we discourage their use because they are now outdated.