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Ksenija Krasina

I am the Administrative Assistant for the Imaging platform, holding dual master’s degrees in Digital Economy and Business from Zagreb University of Applied Sciences, as well as Cultural and Fashion studies from the University of Zagreb. My interests lie in the financial aspect of nonprofit...

Kamal Hamid

I am a postdoctoral associate at the Cimini Lab with a background in physiology and neuroscience, and a passion for bioimage analysis. I aim to explore and develop deep learning strategies for the biologically informed integration of spatial transcriptomic data with image-based profiles.

Research

Our main research theme is empowering biologists with easy-to-use, comprehensively documented tools that facilitate discovery from biological images. From organelles to organisms, we create tools and workflows that allow biologists to find the objects they care about in microscopy images and...

Esteban Miglietta

I am a Biologist by training and an Image Analyst by choice. Microscopy images allow us a unique insight on cells function and respond to stimuli. As a postdoctoral associate in the Cimini Lab, I aim to learn to apply and develop tools to help researchers turn their beautiful microscopy images into...

Le Liu

I am a graduate student from the University of Massachusetts Amherst. I am fascinated by applying high-throughput imaging analysis to understand biological questions. It is a great opportunity for me to learn advanced software and machine learning methods!

Cimini Lab

Cimini Lab at the Broad Institute of MIT and Harvard

Beth A. Cimini

CV

Software and code

CellProfiler CellProfiler is a free open-source software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically. More information can be found in the CellProfiler Wiki. Download CellProfiler...

Nodar Gogoberidze

My background and education, through to my master's degree, has been centered at the intersection of Software Engineering and Data Science. I'm excited by the application of research and innovation in these domains towards slow, arduous, or otherwise intractable problems.

CellProfiler workshop - joint with LABI!

We will be hosting a free CellProfiler workshop on April 8th, joint with Latin America Bioimaging - with breakout rooms available for Spanish and Portuguese. Get more info and sign up here!