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HiC-bench: Comprehensive and Reproducible Hi-C data Analysis Designed for Parameter Exploration and Benchmarking
Lazaris, Charalampos, Stephen Kelly, Panagiotis Ntziachristos, Iannis Aifantis, and Aristotelis Tsirigos. 2017. “HiC-Bench: Comprehensive and Reproducible Hi-C Data Analysis Designed for Parameter Exploration and Benchmarking”. BMC Genomics 18: 22-22.
RNA-Mediated Feedback Control of Transcriptional Condensates
Henninger, JE, Oksuz, Shrinivas, Sagi, LeRoy, MM Zheng, JO Andrews, et al. 2021. “RNA-Mediated Feedback Control of Transcriptional Condensates”. Cell.
Extent and Context Dependence of Pleiotropy Revealed by High-throughput Single-cell Phenotyping
Geiler-Samerotte, Kerry A., Shuang Li, Charalampos Lazaris, Austin Taylor, Naomi Ziv, Chelsea Ramjeawan, Annalise B. Paaby, and Mark L. Siegal. 2020. “Extent and Context Dependence of Pleiotropy Revealed by High-Throughput Single-Cell Phenotyping”. PLoS Biol 18: e3000836-e3000836.
Opposing Functions of H2BK120 Ubiquitylation and H3K79 Methylation in the Regulation of Pluripotency by the Paf1 Complex
Strikoudis, Alexandros, Charalampos Lazaris, Panagiotis Ntziachristos, Aristotelis Tsirigos, and Iannis Aifantis. 2017. “Opposing Functions of H2BK120 Ubiquitylation and H3K79 Methylation in the Regulation of Pluripotency by the Paf1 Complex”. Cell Cycle 16: 2315-22.
The Ubiquitin Ligase Huwe1 Regulates the Maintenance and Lymphoid Commitment of Hematopoietic Stem Cells
King, Bryan, Francesco Boccalatte, Kelly Moran-Crusio, Elmar Wolf, Jingjing Wang, Clarisse Kayembe, Charalampos Lazaris, et al. 2016. “The Ubiquitin Ligase Huwe1 Regulates the Maintenance and Lymphoid Commitment of Hematopoietic Stem Cells”. Nat Immunol 17: 1312-21.
Broad Institute of MIT and Harvard
Lazaris - MIT website
Whitehead Institute for Biomedical Research
On Epigenetic Plasticity and Genome Topology
Lazaris, Charalampos, Iannis Aifantis, and Aristotelis Tsirigos. 2020. “On Epigenetic Plasticity and Genome Topology”. Trends Cancer 6: 177-80.