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Alex Lu

Person: Senior Researcher, Microsoft Research

Alex Lu, PhD Alex is a Senior Researcher at Microsoft Research and is interested in how machine learning can help us discover new insights from biological data, by finding patterns that are too subtle or large-scale to identify unassisted. Alex’s research primarily focuses on biological images, with...

Harry Li

Person: Master's Student, Harvard Medical School

Harry Li Harry studies Biomedical Informatics at Harvard Medical School. He is interested in how advanced AI can help us interpret cancer cell plasticity and optimizing bioinformatic pipelines. In his free time, Harry enjoys playing the French Horn, cooking, and long-distance runs.Harry grew up in...

Lorin Crawford

Person: Principal Researcher, Co-Director Ex Vivo, Microsoft Research

Lorin Crawford PhD I am a Principal Researcher at Microsoft Research in Cambridge, MA. I also maintain a faculty position in the School of Public Health at Brown University with an affiliation in the Center for Computational Molecular Biology. The central aim of my research program is to develop...

Publications

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1. Pinkard H, Stuurman N, Ivanov IE, Anthony NM, Wei O, Li B, Yang B, Tsuchida MA, Chhun BB, Zhang G, Mei R, Anderson M, Shepherd D, Hunt-Isaak I, Dunn RL, Jahr W, Kato S, Royer LA, Thiagarajah J, Eliceiri K, Lundberg E, Mehta SB, Waller L. Pycro-Manager: open-source software for customized and...

Kamal Hamid

Person: Postdoctoral Associate in Spatial Image Analysis

I am a postdoctoral associate at the Cimini Lab with a background in physiology and neuroscience, and a passion for bioimage analysis. I aim to explore and develop deep learning strategies for the biologically informed integration of spatial transcriptomic data with image-based profiles.

CD300LF Polymorphisms of Inbred Mouse Strains Confer Resistance to Murine Norovirus Infection in a Cell Type-Dependent Manner.

Publication: Journal Article

Furlong, Kevin, Scott B Biering, Jayoung Choi, Craig B Wilen, Robert C Orchard, Christiane E Wobus, Christopher A Nelson, et al. 2020. “CD300LF Polymorphisms of Inbred Mouse Strains Confer Resistance to Murine Norovirus Infection in a Cell Type-Dependent Manner.”. Journal of Virology 94 (17).

Murine Norovirus Infection Induces TH1 Inflammatory Responses to Dietary Antigens.

Publication: Journal Article

Bouziat, Romain, Scott B Biering, Elaine Kouame, Kishan A Sangani, Soowon Kang, Jordan D Ernest, Mukund Varma, et al. 2018. “Murine Norovirus Infection Induces TH1 Inflammatory Responses to Dietary Antigens.”. Cell Host & Microbe 24 (5): 677-688.e5.

LysMD3 is a type II membrane protein without an in vivo role in the response to a range of pathogens.

Publication: Journal Article

Yokoyama, Christine C, Megan T Baldridge, Daisy W Leung, Guoyan Zhao, Chandni Desai, Ta-Chiang Liu, Vladimir E Diaz-Ochoa, et al. 2018. “LysMD3 Is a Type II Membrane Protein Without an in Vivo Role in the Response to a Range of Pathogens.”. The Journal of Biological Chemistry 293 (16): 6022-38.

Quo vadis? Interferon-inducible GTPases go to their target membranes via the LC3-conjugation system of autophagy.

Publication: Journal Article

Choi, Jayoung, Scott B Biering, and Seungmin Hwang. 2017. “Quo Vadis? Interferon-Inducible GTPases Go to Their Target Membranes via the LC3-Conjugation System of Autophagy.”. Small GTPases 8 (4): 199-207.

Targeting by AutophaGy proteins (TAG): Targeting of IFNG-inducible GTPases to membranes by the LC3 conjugation system of autophagy.

Publication: Journal Article

Park, Sungwoo, Jayoung Choi, Scott B Biering, Erin Dominici, Lelia E Williams, and Seungmin Hwang. 2016. “Targeting by AutophaGy Proteins (TAG): Targeting of IFNG-Inducible GTPases to Membranes by the LC3 Conjugation System of Autophagy.”. Autophagy 12 (7): 1153-67.