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Anna Greka MD, PHD
Photo credit: Martin Adolfsson Associate Professor Harvard Medical School Brigham and Women’s Hospital Institute Member Director Kidney Disease Initiative Broad Institute of MIT and Harvard With a focus on laying the foundation for molecularly targeted therapies, Anna’s scientific work is centered...
Published: "Open-source deep-learning software for bioimage segmentation"
American Society for Cell Biology journal Molecular Biology of the Cell published a manuscript from COBA researchers surveying several new open-source software tools that aim to make deep-learning–based image segmentation accessible to biologists with limited computational experience. Read the paper...
Free online image analysis workshop for beginners!
June 24: This interactive workshop will focus on adapting CellProfiler pipelines to new datasets. Undergrad / early grad students will be prioritized, but all are welcome. Sign up (space limited): http://broad.io/cellprofilerworkshopsignup. This course will be jointly led by Julia van den Beemd and...
Anne Carpenter Awarded American Society for Cell Biology’s Women in Cell Biology Mid-career Award
COBA's Anne Carpenter recently won the American Society for Cell Biology's Women in Cell Biology Mid-career Award. As part of this award, Carpenter wrote an award essay, "A well-engineered path into cell biology and academia", published in the November 30 issue of Molecular Biology of the Cell. Of...
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Proin rutrum purus eget sollicitudin rhoncus. Duis scelerisque turpis quis nisl lacinia rutrum. Donec ornare sed nibh non scelerisque. Email@gmail.com
Published: "The ImageJ ecosystem: Open-source software for image visualization, processing, and analysis"
Protein Society journal Protein Science published a manuscript from co-PI Kevin Eliceiri's group highlighting the ImageJ codebase and community, including a review of the core features of the ImageJ ecosystem and how ImageJ has responded to imaging technology advancements with new plugins and tools...
Getting started using CellProfiler from the command line
Beth Cimini Cross posted from our GitHub wiki — check there for any future updates! Running CellProfiler from the command line has a major advantage — you don't need to spend computational power or memory creating the graphical user interface (GUI) that you're used to using in CellProfiler! It also...
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Our Team
Anna Greka Katie Liguori Administrative Assistant kliguori@broadinstitute.org Matthew Racette Lab Manager mracette@broadinstitute.org Jillian Shaw Scientific Advisor Juan Lorenzo Pablo Senior Scientist Masha Alimova Senior Scientist Nicolas Wieder Keith Keller Silvana Bazua Valeria Padovano Julie...