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New public workflow available!

We are pleased to announce that our first publicly available bio image analysis workflow (an outcome of a collaboration with the Newmark lab at Morgridge Institute for Research) is now available via our COBA GitHub repository. This example workflow automatically detects, orders, and saves individual...

Published: "Open-source deep-learning software for bioimage segmentation"

American Society for Cell Biology journal Molecular Biology of the Cell published a manuscript from COBA researchers surveying several new open-source software tools that aim to make deep-learning–based image segmentation accessible to biologists with limited computational experience. Read the paper...

Free online image analysis workshop for beginners!

June 24: This interactive workshop will focus on adapting CellProfiler pipelines to new datasets. Undergrad / early grad students will be prioritized, but all are welcome. Sign up (space limited): http://broad.io/cellprofilerworkshopsignup. This course will be jointly led by Julia van den Beemd and...

Kevin Eliceiri Elected to AIMBE 2021 Fellows

The American Institute for Medical and Biological Engineering (AIMBE) announced today the election of 174 new members of the AIMBE College of Fellows in recognition of their distinguished and continuing achievements in medical and biological engineering. COBA's own Kevin Eliceiri is among those...

Workshops

Over the past year, we partnered with several renowned research organizations (e.g. EMBL-EBI) and bioimaging-focused groups (e.g. African Bioimaging Consortium) across the world to deliver highly popular hands-on image analysis workshops. These efforts included the first-ever CellProfiler workshop...

Tech R&D Projects

Building on the team’s expertise in developing algorithms and user-friendly software for use in biology under real-world conditions, the Center will focus on two Technology Research and Development (TR&D) projects: (1) deep learning-based image processing, and (2) workflows and accessibility of...

Project Inquiry

COBA periodically reviews project proposals from the community, seeking driving biological projects related to the technological advancements in progress for a long-term (many months) collaborations. Principal Investigators with laboratories in the United States are welcome to describe a potential...

Anne Carpenter Elected to AIMBE 2020 Fellows

The American Institute for Medical and Biological Engineering (AIMBE) announced today the election of 156 new members of the AIMBE College of Fellows in recognition of their distinguished and continuing achievements in medical and biological engineering. COBA's own Anne Carpenter is among those...

Anne Carpenter Awarded Honorary Fellowship of the Royal Microscopical Society

The Council of the Royal Microscopical Society announced today that COBA's Anne Carpenter was unanimously voted to receive an Honorary Fellowship of the Royal Microscopy Society. Honorary Fellowships are bestowed by the Society for preeminence in microscopy and related branches of science. According...