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The Center for Open Bioimage Analysis (COBA) at Broad Institute and LOCI UW-Madison, as well as the Fiji development team at Max Planck Institute of Molecular Cell Biology and Genetics in Dresden, is pleased to formally announce the 2022 “From Images to Knowledge with ImageJ & Friends (I2K)”...

COBA paper on ImageJ and CellProfiler rated #1 in Altmetrics for Best of Current Protocols 2021! ImageJ and CellProfiler: Complements in Open-Source Bioimage Analysis ImageJ and CellProfiler have long been leading open-source platforms in the field of bioimage analysis. ImageJ's traditional strength...

BMC Bioinformatics published a paper by members of the COBA team detailing the release of CellProfiler 4. CellProfiler 4 provides significantly improved performance in complex workflows compared to previous versions. This release will ensure that researchers will have continued access to...

The American Institute for Medical and Biological Engineering (AIMBE) announced today the election of 156 new members of the AIMBE College of Fellows in recognition of their distinguished and continuing achievements in medical and biological engineering. COBA's own Anne Carpenter is among those...

The Council of the Royal Microscopical Society announced today that COBA's Anne Carpenter was unanimously voted to receive an Honorary Fellowship of the Royal Microscopy Society. Honorary Fellowships are bestowed by the Society for preeminence in microscopy and related branches of science. According...

American Society for Cell Biology journal Molecular Biology of the Cell published a manuscript from COBA researchers surveying several new open-source software tools that aim to make deep-learning–based image segmentation accessible to biologists with limited computational experience. Read the paper...

June 24: This interactive workshop will focus on adapting CellProfiler pipelines to new datasets. Undergrad / early grad students will be prioritized, but all are welcome. Sign up (space limited): http://broad.io/cellprofilerworkshopsignup.This course will be jointly led by Julia van den Beemd and...

Genetic Engineering & Biotechnology News today featured COBA's Anne Carpenter and her group at the Broad Institute for their work launching a Cell Imaging Consortium. The consortium includes 12 pharmaceutical and biotechnology companies and received funding through the Massachusetts Life Sciences...

From Images to Knowledge with ImageJ & Friends (I2K) was originally scheduled for September 17-18, 2020 in Madison, WI. Due to travel restrictions, we are pleased to announce that our partners in the I2K series are holding an online version of the I2K meeting at HHMI Janelia this Nov 30-Dec 2, 2020...

Protein Society journal Protein Science published a manuscript from co-PI Kevin Eliceiri's group highlighting the ImageJ codebase and community, including a review of the core features of the ImageJ ecosystem and how ImageJ has responded to imaging technology advancements with new plugins and tools...