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Impact of CellProfiler on human health Our CellProfiler software has yielded discoveries in several translational projects, some of which may ultimately have a direct impact on the treatment of disease [ read more here]. Public videos of talks and PDF slides Links to PDFs of slides from recent talks...

For our latest work, check out our preprints on bioRxiv! ( Carpenter) ( Singh) Google Scholar pages (with citation metrics): ( Carpenter) ( Singh) 212. Rouquié D, Bender A, Cheah J, Crute C, Dalmas D, Ewald J, Fullerton A, Harrill JA, Kadri S, Kleinstreuer N, Kramer N, LaRocca J, Mitchell CA, Seal S...

Jonathan currently leads a funded research portfolio of over $7 million dollars in data infrastructure and governance grants. He currently serves as the Principal Investigator for the Analysis, Visualization, and Informatics Lab-space (AnVIL) funded by the National Human Genome Research Institute...

Jonathan has led software, data engineering, and operations teams in genomic data sharing for nearly a decade. The development and operation of these projects have served the needs of numerous governments, research programs, labs, and individual researchers - ultimately enabling them to do more...

Our lab is always looking for talented and motivated researchers. Interested candidates should submit a CV along with a cover letter describing their research experience and interests. Current Opportunities: https://broadinstitute.avature.net/en_US/careers/JobDetail/Research-Scientist-I-MDL/21198...

We welcome contributions of the following: Image sets with descriptions and ground truth High-throughput image sets Published benchmarking results of algorithms applied to the BBBC image sets Corrections to existing descriptions or ground truth Feedback on the benchmarking methodology or other...

CellProfiler Analyst (CPA) provides tools for classifying biological images and exploring and visualizing multidimensional data (particularly from high-throughput experiments) that has been extracted from companion image analysis software CellProfiler. CellProfiler Analyst’s primary tools: Image...

Accession number BBBC008 · Version 1 Example images Biological application These images are of human HT29 colon cancer cells, a cell line that has been widely used for the study of many normal and neoplastic processes. A set of about 43,000 such images was used by Moffat et al. (Cell, 2006) to...

Accession number BBBC020 · Version 1 Note: BBBC has received a complaint that "BBB020_v1_outlines_nuclei" appears incomplete and we have been unable to obtain the missing images from the original contributor. Example Images Merged CD11b/APC DAPI Biological application These images depict bone-marrow...