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Lazaris, Charalampos, Stephen Kelly, Panagiotis Ntziachristos, Iannis Aifantis, and Aristotelis Tsirigos. 2017. “HiC-Bench: Comprehensive and Reproducible Hi-C Data Analysis Designed for Parameter Exploration and Benchmarking”. BMC Genomics 18: 22-22.

Lazaris, Charalampos, Iannis Aifantis, and Aristotelis Tsirigos. 2020. “On Epigenetic Plasticity and Genome Topology”. Trends Cancer 6: 177-80.

Fanok, Melania H., Amy Sun, Laura K. Fogli, Vijay Narendran, Miriam Eckstein, Kasthuri Kannan, Igor Dolgalev, et al. 2018. “Role of Dysregulated Cytokine Signaling and Bacterial Triggers in the Pathogenesis of Cutaneous T-Cell Lymphoma”. J Invest Dermatol 138: 1116-25.

Kourtis, Nikos, Rana S. Moubarak, Beatriz Aranda-Orgilles, Kevin Lui, Iraz T. Aydin, Thomas Trimarchi, Farbod Darvishian, et al. 2015. “FBXW7 Modulates Cellular Stress Response and Metastatic Potential Through HSF1 Post-Translational Modification”. Nat Cell Biol 17: 322-32.

Kourtis, Nikos, Charalampos Lazaris, Kathryn Hockemeyer, Juan Carlos Balandrán, Alejandra R. Jimenez, Jasper Mullenders, Yixiao Gong, et al. 2018. “Oncogenic Hijacking of the Stress Response Machinery in T Cell Acute Lymphoblastic Leukemia”. Nat Med 24: 1157-66.

Gong, Yixiao, Charalampos Lazaris, Theodore Sakellaropoulos, Aurelie Lozano, Prabhanjan Kambadur, Panagiotis Ntziachristos, Iannis Aifantis, and Aristotelis Tsirigos. 2018. “Stratification of TAD Boundaries Reveals Preferential Insulation of Super-Enhancers by Strong Boundaries”. Nat Commun 9: 542-42.

Modrek, Aram S., Danielle Golub, Themasap Khan, Devin Bready, Jod Prado, Christopher Bowman, Jingjing Deng, et al. 2017. “Low-Grade Astrocytoma Mutations in IDH1, P53, and ATRX Cooperate to Block Differentiation of Human Neural Stem Cells via Repression of SOX2”. Cell Rep 21: 1267-80.

Strikoudis, Alexandros, Charalampos Lazaris, Thomas Trimarchi, Antonio L. Galvao Neto, Yan Yang, Panagiotis Ntziachristos, Scott Rothbart, et al. 2016. “Regulation of Transcriptional Elongation in Pluripotency and Cell Differentiation by the PHD-Finger Protein Phf5a”. Nat Cell Biol 18: 1127-38.

Henninger, JE, Oksuz, Shrinivas, Sagi, LeRoy, MM Zheng, JO Andrews, et al. 2021. “RNA-Mediated Feedback Control of Transcriptional Condensates”. Cell.

Geiler-Samerotte, Kerry A., Shuang Li, Charalampos Lazaris, Austin Taylor, Naomi Ziv, Chelsea Ramjeawan, Annalise B. Paaby, and Mark L. Siegal. 2020. “Extent and Context Dependence of Pleiotropy Revealed by High-Throughput Single-Cell Phenotyping”. PLoS Biol 18: e3000836-e3000836.